Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04035
Experiment: 36hr PHYTO4 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO4 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 918,446 | - | BPHYT_RS04030 | 0.49 | +1.8 | |
| 918,458 | - | BPHYT_RS04030 | 0.49 | -0.6 | |
| 918,463 | + | BPHYT_RS04030 | 0.50 | +0.2 | |
| 920,322 | + | BPHYT_RS04035 | 0.73 | +0.3 | |
| 920,323 | - | BPHYT_RS04035 | 0.73 | -0.1 | |
| 920,329 | - | BPHYT_RS04035 | 0.73 | -0.1 | |
| 920,329 | - | BPHYT_RS04035 | 0.73 | +1.9 | |
| 921,252 | - | BPHYT_RS04040 | 0.39 | -1.0 | |
| 921,281 | - | BPHYT_RS04040 | 0.41 | -1.3 | |
| 921,385 | + | BPHYT_RS04040 | 0.48 | -0.2 | |
| 921,468 | + | BPHYT_RS04040 | 0.54 | -1.5 |
Or see this region's nucleotide sequence