Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03455

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
777,642	+				-0.0
777,642	+				-1.8
777,642	+				+0.2
777,643	-				-0.9
777,725	+				-0.5
777,728	+				+1.0
777,728	+				+0.3
777,728	+				-0.5
777,728	+				-0.5
777,729	-				-0.1
777,729	-				+1.2
777,729	-				+0.3
777,739	+				-0.6
777,753	+				-0.5
777,754	-				+2.1
777,754	-				-0.9
777,839	+				-0.3
777,909	+		BPHYT_RS03450	0.14	-0.0
777,910	-		BPHYT_RS03450	0.14	+1.3
777,911	+		BPHYT_RS03450	0.14	+2.0
778,147	-		BPHYT_RS03450	0.44	-0.1
778,147	-		BPHYT_RS03450	0.44	+0.8
778,147	-		BPHYT_RS03450	0.44	+1.1
778,147	-		BPHYT_RS03450	0.44	-0.4
778,174	-		BPHYT_RS03450	0.47	+1.0
778,247	+		BPHYT_RS03450	0.57	+1.1
778,248	-		BPHYT_RS03450	0.57	-0.8
778,273	+		BPHYT_RS03450	0.60	+0.5
778,274	-		BPHYT_RS03450	0.60	-0.1
778,600	+				+0.1
778,601	-				+1.1
778,601	-				+2.6
778,775	-		BPHYT_RS03455	0.27	+2.6
778,776	+		BPHYT_RS03455	0.27	+1.4
778,777	-		BPHYT_RS03455	0.28	+1.6
778,859	-		BPHYT_RS03455	0.40	-1.8
779,201	+				+0.2
779,201	+				+0.9
779,202	-				+1.0
779,202	-				+0.9
779,224	-				+1.0
779,254	+				+0.7
779,510	+		BPHYT_RS03460	0.16	-0.7
779,511	-		BPHYT_RS03460	0.16	+0.2
779,677	+		BPHYT_RS03460	0.26	+1.7
779,678	-		BPHYT_RS03460	0.26	+0.7
779,699	+		BPHYT_RS03460	0.27	+1.6
779,699	+		BPHYT_RS03460	0.27	+1.3
779,699	+		BPHYT_RS03460	0.27	+0.8
779,770	+		BPHYT_RS03460	0.31	-0.2
779,770	+		BPHYT_RS03460	0.31	+0.7
779,770	+		BPHYT_RS03460	0.31	+1.9
779,770	+		BPHYT_RS03460	0.31	+1.2