Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34805

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,411,858	-				-0.6
3,411,889	+				-0.1
3,411,898	-				+0.2
3,411,915	+				+0.1
3,411,989	-				+1.0
3,412,099	+		BPHYT_RS34800	0.22	+0.2
3,412,099	+		BPHYT_RS34800	0.22	-1.0
3,412,457	+				-0.3
3,412,458	-				+0.1
3,412,458	-				+0.3
3,412,461	+				-0.0
3,412,462	-				-0.2
3,412,462	-				+1.4
3,412,462	-				-0.2
3,412,462	-				-1.0
3,412,491	-				-0.9
3,412,610	-				+0.2
3,412,610	-				-1.2
3,412,610	-				-0.3
3,412,613	+				-1.3
3,412,614	-				+0.4
3,412,614	-				+0.5
3,412,614	-				-0.6
3,412,614	-				-0.2
3,412,934	+		BPHYT_RS34805	0.31	+2.2
3,412,934	+		BPHYT_RS34805	0.31	-0.2
3,412,935	-		BPHYT_RS34805	0.32	-2.2
3,412,995	+		BPHYT_RS34805	0.37	-2.4
3,413,018	+		BPHYT_RS34805	0.40	+0.2
3,413,019	-		BPHYT_RS34805	0.40	-0.2
3,413,019	-		BPHYT_RS34805	0.40	-1.7
3,413,097	-		BPHYT_RS34805	0.47	+2.7
3,413,126	+		BPHYT_RS34805	0.50	+1.2
3,413,127	-		BPHYT_RS34805	0.50	-0.6
3,413,210	+		BPHYT_RS34805	0.58	-1.4
3,413,455	+		BPHYT_RS34805	0.82	+0.2
3,413,456	-		BPHYT_RS34805	0.83	-1.7
3,413,456	-		BPHYT_RS34805	0.83	-2.4
3,413,638	+				-0.8
3,413,638	+				-0.2
3,413,638	+				-0.2
3,413,639	-				-0.6
3,413,641	-				-0.4
3,413,641	-				-0.8
3,413,641	-				+0.7
3,413,850	+				+1.2
3,413,850	+				+0.5
3,413,887	+				+1.2
3,413,887	+				-0.2
3,413,937	-		BPHYT_RS34810	0.11	-0.8
3,414,579	+		BPHYT_RS34810	0.36	-2.8
3,414,580	-		BPHYT_RS34810	0.36	-0.4