Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34320

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,304,557	+		BPHYT_RS34315	0.60	-0.4
3,304,557	+		BPHYT_RS34315	0.60	-0.7
3,304,685	+		BPHYT_RS34315	0.85	-0.1
3,304,686	-		BPHYT_RS34315	0.85	-0.0
3,304,825	+				+0.3
3,304,933	-				+1.8
3,305,283	+				-1.4
3,305,284	-				+1.3
3,305,288	+				+0.5
3,305,416	+		BPHYT_RS34320	0.12	-1.6
3,305,416	+		BPHYT_RS34320	0.12	+1.2
3,305,477	+		BPHYT_RS34320	0.33	+0.5
3,305,552	+		BPHYT_RS34320	0.59	+1.5
3,305,660	+				+0.0
3,305,661	-				-0.5
3,305,714	+				-0.2
3,305,715	-				+0.3
3,305,715	-				+0.5
3,305,772	+				+1.5
3,305,824	+				-0.4
3,305,935	+		BPHYT_RS34325	0.11	-0.4
3,306,182	-		BPHYT_RS34325	0.31	+2.0
3,306,182	-		BPHYT_RS34325	0.31	-1.2
3,306,272	+		BPHYT_RS34325	0.39	-0.3
3,306,273	-		BPHYT_RS34325	0.39	-0.7
3,306,301	+		BPHYT_RS34325	0.41	-2.2
3,306,302	-		BPHYT_RS34325	0.41	-0.6
3,306,302	-		BPHYT_RS34325	0.41	+1.3
3,306,458	-		BPHYT_RS34325	0.54	+1.2
3,306,562	+		BPHYT_RS34325	0.63	-0.2