Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34080

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,242,810	-		BPHYT_RS34070	0.59	+0.1
3,242,810	-		BPHYT_RS34070	0.59	-0.2
3,243,055	-		BPHYT_RS34075	0.14	+0.8
3,243,082	-		BPHYT_RS34075	0.18	+0.5
3,243,451	+		BPHYT_RS34075	0.76	-0.9
3,243,472	+		BPHYT_RS34075	0.79	-0.2
3,243,565	-				-0.9
3,243,597	+				+0.7
3,243,627	-				-0.1
3,243,922	+		BPHYT_RS34080	0.19	+0.7
3,244,358	+		BPHYT_RS34080	0.59	+1.5
3,244,640	-		BPHYT_RS34080	0.84	+0.3
3,244,786	-				-0.3
3,244,852	+				+2.1
3,244,902	+				+0.5
3,244,962	+				+0.4
3,244,963	-				-0.0
3,244,974	-				-2.1
3,245,019	+				-1.0
3,245,019	+				-0.7
3,245,079	-		BPHYT_RS34085	0.14	+1.8
3,245,117	+		BPHYT_RS34085	0.18	+0.0
3,245,375	+		BPHYT_RS34085	0.49	-0.9
3,245,771	+				-0.3
3,245,772	-				-0.4