Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34020

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,231,337	-		BPHYT_RS34015	0.41	+3.0
3,231,506	+		BPHYT_RS34015	0.52	+0.7
3,231,507	-		BPHYT_RS34015	0.52	-0.0
3,231,507	-		BPHYT_RS34015	0.52	-0.1
3,231,507	-		BPHYT_RS34015	0.52	-0.3
3,231,675	+		BPHYT_RS34015	0.63	-1.9
3,231,676	-		BPHYT_RS34015	0.63	-0.6
3,231,677	+		BPHYT_RS34015	0.63	-0.4
3,231,720	+		BPHYT_RS34015	0.66	-1.3
3,231,853	-		BPHYT_RS34015	0.75	-0.2
3,231,921	-		BPHYT_RS34015	0.79	+0.1
3,232,249	+				+1.0
3,232,249	+				-0.6
3,232,484	+		BPHYT_RS34020	0.28	+0.6
3,232,485	-		BPHYT_RS34020	0.28	-0.9
3,232,507	-		BPHYT_RS34020	0.31	-2.4
3,232,507	-		BPHYT_RS34020	0.31	-0.1
3,232,721	-		BPHYT_RS34020	0.55	-2.0
3,232,721	-		BPHYT_RS34020	0.55	-0.7
3,232,934	-		BPHYT_RS34020	0.79	-0.0
3,233,025	-		BPHYT_RS34020	0.89	-0.9
3,233,091	+				-0.0
3,233,702	-		BPHYT_RS34025	0.81	+1.0
3,233,982	-				-0.9
3,234,116	+				+1.0