Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33850

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,185,151	+		BPHYT_RS33840	0.83	+0.1
3,185,151	+		BPHYT_RS33840	0.83	-0.9
3,185,151	+		BPHYT_RS33840	0.83	-0.2
3,185,152	-		BPHYT_RS33840	0.83	+0.0
3,185,152	-		BPHYT_RS33840	0.83	+0.5
3,185,152	-		BPHYT_RS33840	0.83	-0.2
3,185,367	+				-0.3
3,185,367	+				-0.5
3,185,367	+				+0.8
3,185,368	-				+0.9
3,185,399	+				+0.7
3,185,399	+				-1.0
3,185,400	-				-0.3
3,185,406	-				-0.1
3,185,524	+				-0.1
3,185,524	+				+0.9
3,185,525	-				-1.5
3,185,525	-				+0.7
3,185,525	-				-2.1
3,185,596	+				-0.2
3,185,597	-				+0.5
3,185,631	+				-0.7
3,185,632	-				-0.3
3,185,924	-		BPHYT_RS33845	0.69	+0.1
3,185,924	-		BPHYT_RS33845	0.69	+0.1
3,185,924	-		BPHYT_RS33845	0.69	-0.7
3,185,924	-		BPHYT_RS33845	0.69	-0.8
3,186,051	+				-0.5
3,186,052	-				+0.3
3,186,087	-				-0.7
3,186,574	-		BPHYT_RS33850	0.53	+0.9
3,186,574	-		BPHYT_RS33850	0.53	+3.1
3,187,056	-				-0.4