Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33740

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,151,477	-				-1.5
3,151,477	-				-0.4
3,151,478	+				-0.9
3,151,478	+				+0.1
3,151,479	-				+0.7
3,151,479	-				-0.1
3,151,723	+		BPHYT_RS33735	0.40	-0.7
3,151,804	+		BPHYT_RS33735	0.59	-0.2
3,151,804	+		BPHYT_RS33735	0.59	-0.3
3,151,804	+		BPHYT_RS33735	0.59	+0.8
3,151,804	+		BPHYT_RS33735	0.59	+1.1
3,151,805	-		BPHYT_RS33735	0.59	-1.6
3,152,116	+		BPHYT_RS33740	0.19	-1.3
3,152,116	+		BPHYT_RS33740	0.19	-0.8
3,152,118	+		BPHYT_RS33740	0.20	+0.5
3,152,475	+		BPHYT_RS33740	0.71	-1.7
3,152,626	-				-0.3
3,152,626	-				-0.2
3,152,708	-				-0.3
3,152,874	+		BPHYT_RS33745	0.12	+0.3
3,152,875	-		BPHYT_RS33745	0.12	-0.7
3,153,227	+		BPHYT_RS33745	0.60	-0.8
3,153,533	+				+0.7
3,153,662	-				+0.1
3,153,668	+				+1.1
3,153,669	-				-0.3