Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32740

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,922,612	+		BPHYT_RS32730	0.70	+1.3
2,922,705	-		BPHYT_RS32730	0.85	+0.6
2,922,867	+		BPHYT_RS32735	0.13	+1.0
2,922,896	+		BPHYT_RS32735	0.19	+0.1
2,922,897	-		BPHYT_RS32735	0.20	+0.8
2,923,028	+		BPHYT_RS32735	0.49	+0.0
2,923,285	+				-0.1
2,923,285	+				-1.0
2,923,492	+		BPHYT_RS32740	0.13	-0.4
2,923,494	+		BPHYT_RS32740	0.13	-1.0
2,923,669	-		BPHYT_RS32740	0.30	-0.4
2,923,692	+		BPHYT_RS32740	0.33	+2.7
2,923,791	+		BPHYT_RS32740	0.42	+0.3
2,923,791	+		BPHYT_RS32740	0.42	-0.5
2,923,792	-		BPHYT_RS32740	0.42	-0.2
2,923,792	-		BPHYT_RS32740	0.42	-1.0
2,923,872	+		BPHYT_RS32740	0.50	+0.5
2,924,172	+		BPHYT_RS32740	0.80	+1.4
2,924,173	-		BPHYT_RS32740	0.80	+0.5
2,924,173	-		BPHYT_RS32740	0.80	-1.8
2,924,383	-				-1.7
2,924,456	-				+0.7
2,924,750	-		BPHYT_RS32745	0.26	-0.2
2,924,782	+		BPHYT_RS32745	0.28	-0.6
2,924,914	+		BPHYT_RS32745	0.38	+0.8
2,924,926	+		BPHYT_RS32745	0.39	+0.4
2,924,926	+		BPHYT_RS32745	0.39	+1.4
2,924,927	-		BPHYT_RS32745	0.39	-0.7
2,924,927	-		BPHYT_RS32745	0.39	-0.8
2,924,942	-		BPHYT_RS32745	0.40	+0.7
2,925,098	-		BPHYT_RS32745	0.52	-0.6