Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32400

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,840,086	+		BPHYT_RS32390	0.73	+0.0
2,840,087	-		BPHYT_RS32390	0.73	+0.5
2,840,207	+				-1.1
2,840,208	-				+0.6
2,840,247	+				-0.8
2,840,260	-				-0.1
2,840,316	-				+0.4
2,840,324	-				+0.5
2,840,374	-				-0.7
2,840,416	+				+0.2
2,840,429	+				+1.0
2,840,530	+		BPHYT_RS32395	0.34	-2.3
2,840,679	+				+1.1
2,840,688	-				+1.1
2,840,889	+				+0.4
2,840,907	-				+0.1
2,841,069	-				+0.5
2,841,113	-				-0.4
2,841,257	-		BPHYT_RS32400	0.32	-0.5
2,841,322	+		BPHYT_RS32400	0.42	-0.5
2,841,579	+		BPHYT_RS32400	0.85	-1.6
2,841,580	-		BPHYT_RS32400	0.85	-1.3
2,841,580	-		BPHYT_RS32400	0.85	-1.6
2,841,745	+				+0.4
2,841,806	+				-0.2
2,841,807	-				-1.6
2,841,941	+				-1.3
2,841,941	+				+0.9
2,841,942	-				+1.1
2,842,044	-				-0.3
2,842,150	-				-0.7
2,842,150	-				-1.2
2,842,256	+				+1.1
2,842,257	-				-2.1
2,842,333	+				+1.1
2,842,334	-				+0.5