Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30340

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,360,558	+		BPHYT_RS30330	0.63	+2.1
2,360,611	-		BPHYT_RS30330	0.71	+0.5
2,361,031	+		BPHYT_RS30335	0.54	-0.6
2,361,032	-		BPHYT_RS30335	0.54	-0.1
2,361,460	-		BPHYT_RS30340	0.26	+1.5
2,361,817	-		BPHYT_RS30340	0.68	-1.6
2,362,079	-				+0.1
2,362,347	-		BPHYT_RS30345	0.33	-1.2
2,362,506	-		BPHYT_RS30345	0.55	+0.2
2,362,536	+		BPHYT_RS30345	0.59	-1.4
2,362,857	-				-1.1
2,362,984	-				+0.5