Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30285

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,348,879	+		BPHYT_RS30280	0.59	-2.6
2,349,113	-				-0.2
2,349,143	+				-1.1
2,349,143	+				+0.4
2,349,189	+				-0.1
2,349,189	+				+0.8
2,349,237	+				+0.7
2,349,249	+				-0.4
2,349,260	-				-0.5
2,349,516	+				+0.5
2,349,609	+				+0.2
2,350,235	-		BPHYT_RS30285	0.26	-1.5
2,350,750	+		BPHYT_RS30285	0.61	-1.7
2,351,245	+				-1.8
2,351,281	+				-0.6
2,351,281	+				-2.0
2,351,282	-				+0.3
2,351,282	-				-1.6
2,351,297	-				+0.1
2,351,842	+				-1.7
2,351,842	+				+0.2
2,352,088	+		BPHYT_RS30290	0.26	+0.2