Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26930

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,615,072	+				+1.6
1,615,110	+				-1.2
1,615,111	-				+0.2
1,615,114	+				-0.2
1,615,114	+				+0.4
1,615,115	-				+0.7
1,615,115	-				+0.1
1,615,178	-				+0.2
1,615,256	-		BPHYT_RS26925	0.25	-2.0
1,615,310	-		BPHYT_RS26925	0.40	+2.2
1,615,355	+		BPHYT_RS26925	0.53	+1.3
1,615,365	-		BPHYT_RS26925	0.56	+0.6
1,615,871	+				-2.6
1,616,737	+		BPHYT_RS26930	0.32	+1.7
1,616,829	+		BPHYT_RS26930	0.36	+1.2
1,616,830	-		BPHYT_RS26930	0.36	+0.9
1,616,830	-		BPHYT_RS26930	0.36	+0.5
1,616,830	-		BPHYT_RS26930	0.36	-0.4
1,616,830	-		BPHYT_RS26930	0.36	+1.9
1,616,830	-		BPHYT_RS26930	0.36	+0.3
1,617,396	+		BPHYT_RS26930	0.57	+1.6
1,617,637	+		BPHYT_RS26930	0.66	+2.0
1,617,771	-		BPHYT_RS26930	0.71	+1.1
1,617,771	-		BPHYT_RS26930	0.71	+1.4
1,617,771	-		BPHYT_RS26930	0.71	+0.6
1,617,954	+		BPHYT_RS26930	0.78	-1.2
1,618,544	+				+0.8
1,618,807	+				-0.6
1,618,813	+				-1.8
1,618,813	+				+0.1
1,618,813	+				+0.1
1,618,813	+				+0.1
1,618,814	-				-0.2
1,618,814	-				+0.6
1,618,820	-				+0.5
1,618,820	-				+0.5
1,619,138	-		BPHYT_RS26935	0.21	+0.2
1,619,138	-		BPHYT_RS26935	0.21	-0.0