Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19555

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
4,397,916	-		BPHYT_RS19550	0.25	-0.2
4,398,158	+		BPHYT_RS19550	0.46	-0.5
4,398,555	+		BPHYT_RS19550	0.82	-0.9
4,398,555	+		BPHYT_RS19550	0.82	-1.6
4,398,555	+		BPHYT_RS19550	0.82	+2.1
4,398,556	-		BPHYT_RS19550	0.82	-0.6
4,398,556	-		BPHYT_RS19550	0.82	-0.5
4,398,700	-				+1.1
4,398,758	+				-0.3
4,398,759	-				+0.6
4,398,791	+				+0.7
4,398,791	+				-0.0
4,398,792	-				-1.1
4,398,808	+				-0.8
4,398,837	+				-0.2
4,398,837	+				-0.2
4,398,838	-				-0.1
4,399,003	+		BPHYT_RS19555	0.23	-1.0
4,399,650	+				-2.3
4,399,650	+				-0.6
4,399,732	+				+0.8
4,399,912	+		BPHYT_RS19560	0.37	+2.1
4,400,334	+				+2.1
4,400,362	-				-0.4
4,400,381	-				-0.9
4,400,426	+				+1.1
4,400,427	-				-0.5
4,400,479	+				+2.1
4,400,479	+				+2.0
4,400,499	+				-0.1
4,400,500	-				+1.8
4,400,500	-				+2.2
4,400,500	-				+1.1
4,400,506	-				+1.5
4,400,506	-				+1.1
4,400,506	-				+0.7
4,400,511	-				+0.5