Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17460

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,954,569	+		BPHYT_RS17455	0.34	-0.7
3,954,570	-		BPHYT_RS17455	0.34	+0.9
3,954,570	-		BPHYT_RS17455	0.34	-0.5
3,954,572	+		BPHYT_RS17455	0.35	-0.1
3,954,572	+		BPHYT_RS17455	0.35	-0.3
3,954,573	-		BPHYT_RS17455	0.35	-0.2
3,954,687	-		BPHYT_RS17455	0.43	-0.2
3,954,725	+		BPHYT_RS17455	0.46	-0.6
3,954,726	-		BPHYT_RS17455	0.46	-0.0
3,954,823	+		BPHYT_RS17455	0.54	+1.0
3,954,866	+		BPHYT_RS17455	0.57	-0.1
3,954,866	+		BPHYT_RS17455	0.57	+0.3
3,954,867	-		BPHYT_RS17455	0.57	-0.2
3,954,903	-				+0.1
3,954,903	-		BPHYT_RS17455	0.60	+0.1
3,954,903	-		BPHYT_RS17455	0.60	-1.8
3,954,903	-		BPHYT_RS17455	0.60	+0.9
3,955,086	-		BPHYT_RS17455	0.73	+0.5
3,955,086	-		BPHYT_RS17455	0.73	+1.5
3,955,087	+		BPHYT_RS17455	0.73	-0.4
3,955,087	+		BPHYT_RS17455	0.73	-0.8
3,955,087	+		BPHYT_RS17455	0.73	-0.0
3,955,088	-		BPHYT_RS17455	0.74	-0.4
3,955,088	-		BPHYT_RS17455	0.74	+0.7
3,955,113	-		BPHYT_RS17455	0.75	-0.9
3,955,185	-		BPHYT_RS17455	0.81	+0.2
3,955,192	+		BPHYT_RS17455	0.81	-0.2
3,955,212	-		BPHYT_RS17455	0.83	-0.7
3,955,275	-		BPHYT_RS17455	0.88	+0.5
3,955,344	+				-0.0
3,955,548	-				+0.0
3,955,548	-				+1.5
3,955,576	+				-0.0
3,955,577	-				+2.9
3,955,689	+		BPHYT_RS17460	0.20	+0.0
3,955,689	+		BPHYT_RS17460	0.20	-1.6
3,955,690	-		BPHYT_RS17460	0.21	-0.1
3,955,690	-		BPHYT_RS17460	0.21	-1.0
3,955,706	+		BPHYT_RS17460	0.22	-0.6
3,955,706	+		BPHYT_RS17460	0.22	-0.4
3,955,722	-		BPHYT_RS17460	0.24	-0.3
3,955,823	+		BPHYT_RS17460	0.36	+0.3
3,955,934	+		BPHYT_RS17460	0.48	-1.6
3,956,018	+		BPHYT_RS17460	0.58	-0.4
3,956,174	-		BPHYT_RS17460	0.75	-2.8
3,956,255	+		BPHYT_RS17460	0.84	+0.3
3,956,256	-		BPHYT_RS17460	0.85	-1.5
3,956,470	+				-0.5
3,956,471	-				+0.4
3,956,471	-				-0.8
3,956,817	+		BPHYT_RS17465	0.51	-0.8
3,956,817	+		BPHYT_RS17465	0.51	-0.3
3,956,817	+		BPHYT_RS17465	0.51	+0.6
3,956,818	-		BPHYT_RS17465	0.51	-0.2
3,956,818	-		BPHYT_RS17465	0.51	-0.7
3,956,822	-		BPHYT_RS17465	0.51	+2.6
3,956,822	-		BPHYT_RS17465	0.51	-0.8
3,956,822	-		BPHYT_RS17465	0.51	+0.6
3,957,031	+		BPHYT_RS17465	0.76	-0.9
3,957,031	+		BPHYT_RS17465	0.76	-1.0
3,957,232	+				+1.3
3,957,232	+				+0.1
3,957,232	+				-1.2
3,957,233	-				-0.3
3,957,362	+				-0.4