Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17040

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,861,596	+				-0.9
3,862,047	+		BPHYT_RS17035	0.46	+1.0
3,862,099	-		BPHYT_RS17035	0.52	+1.0
3,862,174	-		BPHYT_RS17035	0.60	+2.0
3,862,178	-		BPHYT_RS17035	0.60	+2.0
3,862,191	+		BPHYT_RS17035	0.62	+2.0
3,862,486	-				+2.0
3,862,549	-				-0.3
3,862,646	+		BPHYT_RS17040	0.14	-0.6
3,862,646	+		BPHYT_RS17040	0.14	-1.5
3,862,724	-		BPHYT_RS17040	0.31	-0.6
3,863,230	+				-0.6
3,863,230	+				-0.3
3,863,278	+				+2.0
3,863,279	-				-2.2
3,863,686	-		BPHYT_RS17045	0.62	-0.6
3,864,037	-		BPHYT_RS17050	0.27	-0.9