Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15465

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,509,419	+		BPHYT_RS15455	0.73	+0.4
3,509,424	+		BPHYT_RS15455	0.74	-1.2
3,509,434	+		BPHYT_RS15455	0.75	-0.9
3,509,560	+				+0.3
3,509,592	-				+0.0
3,509,704	+				-0.2
3,509,709	+				+0.7
3,509,742	+				-1.3
3,509,789	+		BPHYT_RS15460	0.14	+0.3
3,509,790	-		BPHYT_RS15460	0.15	-0.2
3,509,790	-		BPHYT_RS15460	0.15	+0.9
3,509,790	-		BPHYT_RS15460	0.15	-0.2
3,509,792	+		BPHYT_RS15460	0.15	+1.5
3,509,792	+		BPHYT_RS15460	0.15	-0.4
3,509,792	+		BPHYT_RS15460	0.15	-2.2
3,509,793	-		BPHYT_RS15460	0.16	-0.3
3,509,816	-		BPHYT_RS15460	0.23	+0.2
3,509,820	+		BPHYT_RS15460	0.24	-1.8
3,509,820	+		BPHYT_RS15460	0.24	+0.3
3,509,922	+		BPHYT_RS15460	0.58	-0.4
3,509,923	-		BPHYT_RS15460	0.58	-3.3
3,510,000	+		BPHYT_RS15460	0.84	+0.1
3,510,048	+				+0.1
3,510,049	-				-0.3
3,510,219	-				-0.2
3,510,282	+				-0.5
3,510,364	+		BPHYT_RS15465	0.14	+0.5
3,510,365	-		BPHYT_RS15465	0.15	-0.2
3,510,372	+		BPHYT_RS15465	0.24	+0.4
3,510,373	-		BPHYT_RS15465	0.26	+0.7
3,510,393	+		BPHYT_RS15465	0.53	+1.9
3,510,441	+				+0.3
3,510,484	+				-0.6
3,510,502	+				+0.6
3,510,580	-				+1.0
3,510,580	-				-0.7
3,510,629	-				-0.5
3,510,643	+				-1.4
3,510,668	-				-0.1
3,510,720	-				+0.2
3,510,769	+				+0.3
3,510,835	+				-0.9
3,510,835	+				-1.0
3,510,836	-				-0.5
3,510,841	-				-0.8
3,510,971	-				+0.3
3,510,971	-				-0.1
3,510,971	-				-0.0
3,511,068	+				-0.1
3,511,068	+				+0.1
3,511,068	+				+0.0
3,511,068	+				-0.9
3,511,068	+				-0.1
3,511,068	+				+0.3
3,511,069	-				+0.5
3,511,069	-				+0.8
3,511,069	-				+0.4