Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15010

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,412,654	-		BPHYT_RS15005	0.64	-0.5
3,412,791	-		BPHYT_RS15005	0.72	+0.4
3,413,297	+				+0.3
3,413,297	+				+0.5
3,413,298	-				-0.9
3,413,302	+				-1.0
3,413,303	-				+0.5
3,413,515	+				-1.6
3,413,803	-		BPHYT_RS15010	0.35	-0.6
3,413,803	-		BPHYT_RS15010	0.35	-0.6
3,413,804	+		BPHYT_RS15010	0.35	-1.7
3,413,862	+		BPHYT_RS15010	0.41	-0.1
3,413,863	-		BPHYT_RS15010	0.41	-0.6
3,414,100	-		BPHYT_RS15010	0.62	+0.4
3,414,679	-		BPHYT_RS15015	0.46	-2.2
3,414,852	-				-1.2
3,414,921	-				-1.0
3,415,020	+				+1.3
3,415,020	+				+0.6
3,415,020	+				+0.3
3,415,328	+		BPHYT_RS15020	0.17	-0.5
3,415,329	-		BPHYT_RS15020	0.17	+0.6
3,415,346	+		BPHYT_RS15020	0.18	-1.9