Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14605

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,325,333	-		BPHYT_RS14600	0.75	-0.3
3,325,333	-		BPHYT_RS14600	0.75	-0.1
3,325,475	-		BPHYT_RS14600	0.85	+0.2
3,325,528	-		BPHYT_RS14600	0.89	-0.1
3,325,697	+				+0.6
3,325,763	+				+0.3
3,326,060	-				-0.3
3,326,079	+				-0.1
3,326,256	+				-0.4
3,326,335	+				+0.5
3,326,336	-				+0.5
3,326,488	+		BPHYT_RS14605	0.22	-1.7
3,326,489	-		BPHYT_RS14605	0.22	-0.8
3,326,705	-		BPHYT_RS14605	0.45	+1.2
3,326,705	-		BPHYT_RS14605	0.45	-1.4
3,326,868	-		BPHYT_RS14605	0.62	-1.0
3,327,082	+		BPHYT_RS14605	0.84	-1.1
3,327,511	+				+1.0
3,327,843	-		BPHYT_RS14610	0.15	-1.0
3,327,845	+		BPHYT_RS14610	0.16	+1.6
3,327,846	-		BPHYT_RS14610	0.16	+0.9
3,327,897	-		BPHYT_RS14610	0.19	+0.1
3,328,041	+		BPHYT_RS14610	0.28	-0.7
3,328,041	+		BPHYT_RS14610	0.28	-1.2
3,328,042	-		BPHYT_RS14610	0.28	-0.3
3,328,042	-		BPHYT_RS14610	0.28	+0.5
3,328,099	+				+0.0
3,328,100	-		BPHYT_RS14610	0.32	-0.3
3,328,100	-		BPHYT_RS14610	0.32	+0.0
3,328,100	-		BPHYT_RS14610	0.32	-1.1
3,328,100	-		BPHYT_RS14610	0.32	-1.1
3,328,100	-		BPHYT_RS14610	0.32	-1.3
3,328,100	-		BPHYT_RS14610	0.32	+0.2