Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14400

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,286,158	+		BPHYT_RS14395	0.36	+1.1
3,286,159	-		BPHYT_RS14395	0.36	+2.0
3,286,165	-		BPHYT_RS14395	0.36	+1.7
3,286,304	+		BPHYT_RS14395	0.50	-0.9
3,286,305	-		BPHYT_RS14395	0.50	+1.4
3,286,386	+		BPHYT_RS14395	0.57	+1.1
3,286,387	-		BPHYT_RS14395	0.57	+2.1
3,286,387	-		BPHYT_RS14395	0.57	+1.6
3,286,499	+		BPHYT_RS14395	0.68	+2.1
3,286,746	+				+1.1
3,286,801	-				+2.2
3,286,836	+				+1.1
3,286,836	+				+0.5
3,286,930	-		BPHYT_RS14400	0.15	+0.1
3,287,314	-		BPHYT_RS14400	0.76	+2.3
3,287,314	-		BPHYT_RS14400	0.76	+2.5
3,287,357	-		BPHYT_RS14400	0.83	+2.7
3,287,479	+				+2.7
3,287,479	+				+1.0
3,287,480	-				+0.7
3,287,480	-				+1.1
3,287,485	+				+2.3
3,287,485	+				+2.0
3,287,486	-				+1.6
3,287,514	-				+1.2
3,288,193	-				+0.3
3,288,193	-				+0.5
3,288,218	-				+0.2
3,288,218	-				+0.7
3,288,324	+		BPHYT_RS14410	0.20	+2.1