Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12050

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,745,849	+		BPHYT_RS12045	0.71	-2.0
2,745,849	+		BPHYT_RS12045	0.71	+0.1
2,745,892	+		BPHYT_RS12045	0.76	-0.0
2,745,892	+		BPHYT_RS12045	0.76	-0.1
2,745,940	+		BPHYT_RS12045	0.81	-2.2
2,745,942	+		BPHYT_RS12045	0.81	-0.8
2,745,943	-		BPHYT_RS12045	0.81	-0.3
2,745,994	+		BPHYT_RS12045	0.87	+0.0
2,745,995	-		BPHYT_RS12045	0.87	+0.9
2,746,118	+				+0.4
2,746,119	-				-0.5
2,746,144	+				+0.7
2,746,144	+				-0.4
2,746,558	+		BPHYT_RS12050	0.83	-0.1
2,746,558	+		BPHYT_RS12050	0.83	-0.6
2,746,667	+				+1.1
2,746,680	-				+0.3
2,746,680	-				-4.0
2,746,680	-				-0.5
2,746,751	-				-0.6
2,746,765	+				-0.9
2,746,943	+				+1.2
2,746,943	+				+0.6
2,746,943	+				+0.8
2,746,943	+				-0.1
2,746,944	-				+2.9
2,746,944	-				+0.4
2,747,351	+		BPHYT_RS12055	0.23	-0.1
2,747,351	+		BPHYT_RS12055	0.23	+0.4
2,747,352	-		BPHYT_RS12055	0.23	+0.1
2,747,429	+		BPHYT_RS12055	0.26	+1.0
2,747,429	+		BPHYT_RS12055	0.26	+0.9
2,747,429	+		BPHYT_RS12055	0.26	+0.4
2,747,430	-		BPHYT_RS12055	0.26	+0.8
2,747,477	+		BPHYT_RS12055	0.28	+0.3
2,747,478	-		BPHYT_RS12055	0.28	+0.8