Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11755
Experiment: 36hr PHYTO3 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO3 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,665,220 | + | BPHYT_RS11750 | 0.22 | -0.7 | |
| 2,665,536 | - | BPHYT_RS11750 | 0.49 | +0.4 | |
| 2,666,183 | - | +1.3 | |||
| 2,666,183 | - | -2.2 | |||
| 2,666,283 | + | BPHYT_RS11755 | 0.13 | -0.8 | |
| 2,666,841 | + | BPHYT_RS11755 | 0.66 | -1.4 | |
| 2,667,944 | + | BPHYT_RS11760 | 0.57 | -0.8 | |
| 2,667,998 | - | BPHYT_RS11760 | 0.61 | -2.4 | |
| 2,668,127 | - | BPHYT_RS11760 | 0.71 | -0.1 | |
| 2,668,174 | + | BPHYT_RS11760 | 0.75 | -1.4 |
Or see this region's nucleotide sequence