Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10650
Experiment: 36hr PHYTO3 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO3 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,425,120 | + | BPHYT_RS10640 | 0.56 | +1.8 | |
| 2,425,429 | - | -0.1 | |||
| 2,425,756 | + | BPHYT_RS10645 | 0.66 | -0.3 | |
| 2,426,055 | + | -1.9 | |||
| 2,426,166 | - | +0.2 | |||
| 2,426,527 | + | BPHYT_RS10650 | 0.56 | -1.1 | |
| 2,426,928 | + | +0.6 | |||
| 2,426,929 | - | -0.2 | |||
| 2,426,934 | - | +0.8 | |||
| 2,427,001 | + | +2.2 | |||
| 2,427,001 | + | -0.8 |
Or see this region's nucleotide sequence