Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09160

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,072,511	+				+0.4
2,072,512	-				+1.1
2,072,535	+				-1.9
2,072,535	+				-0.4
2,072,598	+		BPHYT_RS09155	0.11	-0.6
2,072,789	+		BPHYT_RS09155	0.37	-0.4
2,072,973	+		BPHYT_RS09155	0.62	-0.8
2,072,973	+		BPHYT_RS09155	0.62	-3.0
2,072,973	+		BPHYT_RS09155	0.62	-0.6
2,073,069	+		BPHYT_RS09155	0.74	-2.0
2,073,248	+				-1.7
2,073,367	-				+1.7
2,073,386	+				-0.8
2,073,397	+				+1.0
2,073,397	+				-1.3
2,073,398	-				+2.0
2,073,474	-		BPHYT_RS09160	0.13	+1.4
2,073,474	-		BPHYT_RS09160	0.13	+1.1
2,073,474	-		BPHYT_RS09160	0.13	+0.6
2,073,650	+		BPHYT_RS09160	0.41	-0.2
2,073,684	-		BPHYT_RS09160	0.47	+0.7
2,073,752	+		BPHYT_RS09160	0.58	+0.4
2,073,836	+		BPHYT_RS09160	0.71	+0.9
2,073,836	+		BPHYT_RS09160	0.71	+0.8
2,073,837	-		BPHYT_RS09160	0.71	-0.8
2,073,837	-		BPHYT_RS09160	0.71	+1.9
2,074,016	+				+0.2
2,074,149	+				+0.3
2,074,149	+				-0.4
2,074,150	-				-0.3
2,074,339	+				-1.8
2,074,340	-				-0.1
2,074,340	-				-2.4
2,074,435	+		BPHYT_RS09165	0.13	+0.8
2,074,555	-		BPHYT_RS09165	0.25	+0.4
2,074,737	+		BPHYT_RS09165	0.43	+0.1
2,074,737	+		BPHYT_RS09165	0.43	+0.3
2,074,738	-		BPHYT_RS09165	0.43	-0.5