Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06350

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,447,073	+		BPHYT_RS06345	0.28	-0.3
1,447,115	+		BPHYT_RS06345	0.32	+0.7
1,447,116	-		BPHYT_RS06345	0.32	+0.0
1,447,217	+		BPHYT_RS06345	0.39	+2.0
1,447,218	-		BPHYT_RS06345	0.39	-0.8
1,447,218	-		BPHYT_RS06345	0.39	-1.3
1,447,223	+		BPHYT_RS06345	0.40	+2.0
1,447,435	-		BPHYT_RS06345	0.56	+2.0
1,447,435	-		BPHYT_RS06345	0.56	-1.1
1,447,522	+		BPHYT_RS06345	0.62	+0.8
1,447,934	+				+0.9
1,448,074	-				+0.3
1,448,074	-				-1.6
1,448,131	-		BPHYT_RS06350	0.23	+1.7
1,448,271	+		BPHYT_RS06350	0.58	+1.7
1,448,351	-		BPHYT_RS06350	0.78	-1.9
1,448,698	+				+1.2
1,448,698	+				-0.3
1,448,698	+				-0.6
1,448,945	+		BPHYT_RS06360	0.32	-1.1
1,448,946	-		BPHYT_RS06360	0.32	+1.2
1,448,946	-		BPHYT_RS06360	0.32	+1.2
1,448,946	-		BPHYT_RS06360	0.32	+0.4
1,448,946	-		BPHYT_RS06360	0.32	-2.2
1,448,953	+		BPHYT_RS06360	0.33	+2.2
1,448,953	+		BPHYT_RS06360	0.33	+0.0
1,448,954	-		BPHYT_RS06360	0.33	+1.0
1,448,954	-		BPHYT_RS06360	0.33	-0.2
1,448,955	+		BPHYT_RS06360	0.33	-0.7
1,449,128	+		BPHYT_RS06360	0.50	+0.7
1,449,129	-		BPHYT_RS06360	0.50	-0.1
1,449,129	-		BPHYT_RS06360	0.50	-1.1
1,449,160	+		BPHYT_RS06360	0.53	+0.4
1,449,160	+		BPHYT_RS06360	0.53	+0.1
1,449,161	-		BPHYT_RS06360	0.53	+0.4
1,449,186	+		BPHYT_RS06360	0.56	-0.0
1,449,223	+		BPHYT_RS06360	0.59	-0.3