Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05025

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,157,536	+		BPHYT_RS05020	0.77	+1.5
1,157,696	+		BPHYT_RS05020	0.87	+1.0
1,157,697	-		BPHYT_RS05020	0.88	-0.7
1,157,697	-		BPHYT_RS05020	0.88	+1.0
1,157,697	-		BPHYT_RS05020	0.88	+0.8
1,157,965	-				+0.2
1,157,998	+				+0.2
1,158,182	-				+1.6
1,158,419	+				-0.4
1,158,420	-				+0.5
1,158,420	-				-1.4
1,158,587	+		BPHYT_RS05025	0.13	+0.5
1,158,797	-				-0.8
1,158,857	+		BPHYT_RS05025	0.35	-0.8
1,159,175	-		BPHYT_RS05025	0.60	+4.6
1,159,493	+		BPHYT_RS05025	0.86	+0.8
1,159,530	-		BPHYT_RS05025	0.89	+1.6
1,159,671	-				-0.1
1,159,791	+				+0.3
1,159,792	-				+1.3
1,159,803	+				-0.1
1,159,871	-				-0.8
1,159,883	+				-0.2
1,159,884	-				-0.7
1,159,884	-				-0.5
1,160,007	+		BPHYT_RS05030	0.14	+0.2
1,160,174	+		BPHYT_RS05030	0.32	+1.0