Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04370

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,005,939	+		BPHYT_RS04365	0.67	+0.6
1,005,940	-		BPHYT_RS04365	0.67	-0.2
1,005,940	-		BPHYT_RS04365	0.67	+1.9
1,005,940	-		BPHYT_RS04365	0.67	+0.3
1,006,030	+		BPHYT_RS04365	0.74	-0.1
1,006,031	-		BPHYT_RS04365	0.74	-0.6
1,006,299	+				+0.5
1,006,299	+				-1.1
1,006,326	+				+0.8
1,006,520	-				-0.3
1,006,524	+				-0.6
1,006,552	+				-0.7
1,006,553	-				-0.1
1,006,600	-				+0.7
1,006,602	+				-0.4
1,006,603	-				+0.4
1,006,603	-				-0.5
1,006,633	+				-1.0
1,006,634	-				-0.3
1,006,671	+				-2.4
1,006,765	+				+0.6
1,006,765	+				+0.4
1,006,780	+				+0.4
1,007,079	+		BPHYT_RS04370	0.35	+2.0
1,007,566	-				+2.0
1,007,624	+				+0.7
1,007,624	+				-0.3