Experiment: 36hr PHYTO3 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS02345 and BPHYT_RS02350 are separated by 97 nucleotides BPHYT_RS02350 and BPHYT_RS02355 are separated by 561 nucleotides
BPHYT_RS02345: BPHYT_RS02345 - enoyl-CoA hydratase, at 537,793 to 538,680
_RS02345
BPHYT_RS02350: BPHYT_RS02350 - hypothetical protein, at 538,778 to 539,599
_RS02350
BPHYT_RS02355: BPHYT_RS02355 - ferritin, at 540,161 to 541,033
_RS02355
Position (kb) 538
539
540 Strain fitness (log2 ratio) -1
0
1 at 537.778 kb on + strand at 537.778 kb on + strand at 537.778 kb on + strand at 537.778 kb on + strand at 537.778 kb on + strand at 537.779 kb on - strand at 537.779 kb on - strand at 537.779 kb on - strand at 537.779 kb on - strand at 537.827 kb on - strand at 538.324 kb on + strand, within BPHYT_RS02345 at 538.324 kb on + strand, within BPHYT_RS02345 at 538.324 kb on + strand, within BPHYT_RS02345 at 538.324 kb on + strand, within BPHYT_RS02345 at 538.325 kb on - strand, within BPHYT_RS02345 at 538.325 kb on - strand, within BPHYT_RS02345 at 538.325 kb on - strand, within BPHYT_RS02345 at 538.327 kb on + strand, within BPHYT_RS02345 at 538.327 kb on + strand at 538.328 kb on - strand, within BPHYT_RS02345 at 538.698 kb on + strand at 538.699 kb on - strand at 538.758 kb on + strand at 539.597 kb on + strand at 539.597 kb on + strand at 539.785 kb on + strand at 539.785 kb on + strand at 539.786 kb on - strand at 539.786 kb on - strand at 539.788 kb on + strand at 539.788 kb on + strand at 539.791 kb on + strand at 539.791 kb on + strand at 539.791 kb on + strand at 539.791 kb on + strand at 539.792 kb on - strand at 539.792 kb on - strand at 539.792 kb on - strand at 539.794 kb on - strand at 539.795 kb on + strand at 539.795 kb on + strand at 539.795 kb on + strand at 539.796 kb on - strand at 539.802 kb on + strand at 539.963 kb on + strand at 540.075 kb on + strand at 540.075 kb on + strand at 540.075 kb on + strand at 540.105 kb on + strand at 540.115 kb on + strand at 540.115 kb on + strand at 540.115 kb on + strand at 540.160 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 36hr PHYTO3 MOI 1 remove 537,778 + +0.5 537,778 + -0.5 537,778 + +0.2 537,778 + +0.3 537,778 + -0.7 537,779 - -0.3 537,779 - -0.0 537,779 - -0.4 537,779 - -0.0 537,827 - +1.4 538,324 + BPHYT_RS02345 0.60 +0.5 538,324 + BPHYT_RS02345 0.60 +0.5 538,324 + BPHYT_RS02345 0.60 +1.0 538,324 + BPHYT_RS02345 0.60 -0.1 538,325 - BPHYT_RS02345 0.60 +0.0 538,325 - BPHYT_RS02345 0.60 +0.1 538,325 - BPHYT_RS02345 0.60 -0.7 538,327 + BPHYT_RS02345 0.60 -0.4 538,327 + -0.5 538,328 - BPHYT_RS02345 0.60 -1.3 538,698 + -0.4 538,699 - -0.4 538,758 + +0.1 539,597 + +0.2 539,597 + +0.2 539,785 + +0.8 539,785 + +0.8 539,786 - -1.4 539,786 - -0.4 539,788 + -0.3 539,788 + +1.3 539,791 + -0.1 539,791 + -0.7 539,791 + -0.3 539,791 + +0.3 539,792 - +0.0 539,792 - +1.0 539,792 - -0.7 539,794 - -0.3 539,795 + -1.3 539,795 + +0.1 539,795 + +0.1 539,796 - +1.0 539,802 + +0.3 539,963 + -1.5 540,075 + +0.5 540,075 + +0.1 540,075 + +0.2 540,105 + -0.4 540,115 + -0.6 540,115 + -1.1 540,115 + +1.3 540,160 + +0.5
Or see this region's nucleotide sequence