Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34855

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,423,496	-				+2.0
3,423,584	+				+0.7
3,423,627	+				+0.2
3,423,628	-				-1.7
3,423,660	+				-0.8
3,423,710	-		BPHYT_RS34850	0.13	+1.1
3,423,710	-		BPHYT_RS34850	0.13	+0.5
3,423,964	+				+0.1
3,424,451	+		BPHYT_RS34855	0.37	-0.7
3,424,568	-		BPHYT_RS34855	0.49	-0.3
3,424,568	-		BPHYT_RS34855	0.49	+0.1
3,424,953	+		BPHYT_RS34855	0.88	+0.3
3,424,954	-		BPHYT_RS34855	0.89	+2.3
3,424,954	-		BPHYT_RS34855	0.89	-0.2
3,424,954	-		BPHYT_RS34855	0.89	+1.0
3,424,954	-		BPHYT_RS34855	0.89	-0.4
3,424,982	-				-0.0
3,424,982	-				-1.3
3,424,982	-				-0.3
3,425,025	-				-0.3
3,425,025	-				+1.2
3,425,278	-				+0.7
3,425,315	+				-1.1
3,425,315	+				+0.0
3,425,315	+				+1.0
3,425,315	+				+0.5
3,425,316	-				-0.6
3,425,316	-				+0.2
3,425,341	+				+1.3
3,425,341	+				-1.1
3,425,341	+				-1.8
3,425,349	-				+0.7
3,425,495	+				-1.1
3,425,495	+				+0.1
3,425,495	+				-0.0
3,425,495	+				+0.5
3,425,495	+				-0.8
3,425,573	+				+0.2
3,425,610	+				+1.3
3,425,638	-				-0.2
3,425,638	-				+0.5
3,425,645	-				+0.3
3,425,692	+				+0.1
3,425,693	-				-0.7
3,425,956	-		BPHYT_RS34860	0.37	-2.4
3,425,983	+		BPHYT_RS34860	0.40	-0.4