Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34665

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,382,983	+				-0.0
3,383,035	-				-1.0
3,383,122	-				+2.5
3,383,122	-				-0.1
3,383,124	-				+0.9
3,383,124	-				-0.7
3,383,558	-		BPHYT_RS34660	0.56	-0.3
3,383,558	-				+2.3
3,383,642	+		BPHYT_RS34660	0.70	+0.7
3,383,642	+		BPHYT_RS34660	0.70	+0.5
3,383,643	-		BPHYT_RS34660	0.70	+0.6
3,383,646	+		BPHYT_RS34660	0.70	-1.2
3,383,646	+		BPHYT_RS34660	0.70	-1.7
3,383,647	-		BPHYT_RS34660	0.70	-0.4
3,383,755	+		BPHYT_RS34660	0.87	-2.1
3,383,816	+				+0.7
3,383,904	-				+2.4
3,383,906	-				-0.3
3,383,992	+		BPHYT_RS34665	0.13	-0.2
3,384,046	+		BPHYT_RS34665	0.27	+1.1
3,384,046	+		BPHYT_RS34665	0.27	+0.6
3,384,047	-		BPHYT_RS34665	0.27	+0.0
3,384,070	-		BPHYT_RS34665	0.33	+2.8
3,384,368	-				-0.3
3,384,382	+				-0.2
3,384,553	-		BPHYT_RS34670	0.14	-0.1
3,384,685	+		BPHYT_RS34670	0.26	+2.1
3,384,974	+		BPHYT_RS34670	0.53	+0.3
3,385,124	-		BPHYT_RS34670	0.67	+0.1
3,385,124	-		BPHYT_RS34670	0.67	+1.7
3,385,158	-		BPHYT_RS34670	0.70	-0.7
3,385,158	-		BPHYT_RS34670	0.70	-0.1
3,385,158	-		BPHYT_RS34670	0.70	-0.8