Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34640

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,378,308	-		BPHYT_RS34630	0.48	-1.1
3,378,311	-		BPHYT_RS34630	0.49	-1.3
3,378,439	+		BPHYT_RS34630	0.74	+0.2
3,378,611	+				+0.7
3,378,611	+				-0.2
3,378,612	-				+0.3
3,378,628	+				-0.5
3,378,628	+				-0.4
3,378,628	+				-1.3
3,378,628	+				-0.5
3,378,629	-				-0.1
3,378,629	-				-1.0
3,378,629	-				+0.1
3,378,849	+		BPHYT_RS34635	0.13	+0.1
3,378,984	+		BPHYT_RS34635	0.41	+0.1
3,378,985	-		BPHYT_RS34635	0.41	-0.5
3,379,270	+				+1.0
3,379,271	-				-0.3
3,379,793	-		BPHYT_RS34640	0.77	+1.7
3,379,865	-		BPHYT_RS34640	0.88	+0.6
3,379,948	+				+0.7
3,379,949	-				+0.5
3,380,019	+				-1.2
3,380,020	-				-1.7
3,380,020	-				+1.3
3,380,148	-		BPHYT_RS34645	0.14	-0.4
3,380,148	-		BPHYT_RS34645	0.14	+0.3
3,380,154	-		BPHYT_RS34645	0.15	+0.5
3,380,247	+		BPHYT_RS34645	0.29	+1.3
3,380,248	-		BPHYT_RS34645	0.30	-1.1
3,380,635	-		BPHYT_RS34645	0.89	-0.3
3,380,654	+				+0.0
3,380,800	-				+0.5