Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34575

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,363,521	-		BPHYT_RS34570	0.74	-0.7
3,363,712	+		BPHYT_RS34570	0.82	+0.5
3,363,713	-		BPHYT_RS34570	0.82	+0.2
3,363,779	-		BPHYT_RS34570	0.85	-0.4
3,363,779	-		BPHYT_RS34570	0.85	-0.6
3,364,020	+				+0.3
3,364,066	+				+1.8
3,364,130	+				-0.2
3,364,192	+				-0.2
3,364,228	+				-0.0
3,364,244	+				-2.8
3,364,330	-				-0.2
3,364,438	-				+0.6
3,365,448	-		BPHYT_RS34575	0.58	-0.2
3,365,730	+		BPHYT_RS34575	0.74	-0.0
3,366,003	+		BPHYT_RS34575	0.90	-0.1
3,366,027	+				-0.2
3,366,126	+				-1.3
3,366,283	+				-0.5
3,366,691	-		BPHYT_RS34580	0.66	-1.4
3,366,720	-		BPHYT_RS34580	0.70	+0.1
3,366,720	-		BPHYT_RS34580	0.70	-1.2
3,366,841	+		BPHYT_RS34580	0.87	-0.2
3,366,842	-		BPHYT_RS34580	0.88	-0.2
3,366,843	+		BPHYT_RS34580	0.88	-1.4
3,366,843	+		BPHYT_RS34580	0.88	-1.1
3,367,050	-		BPHYT_RS34585	0.31	-0.5
3,367,110	+		BPHYT_RS34585	0.45	-1.5
3,367,111	-		BPHYT_RS34585	0.46	-0.6
3,367,175	+		BPHYT_RS34585	0.61	-0.1
3,367,176	-		BPHYT_RS34585	0.62	-0.2
3,367,176	-		BPHYT_RS34585	0.62	+0.0
3,367,180	-		BPHYT_RS34585	0.62	-1.4
3,367,180	-		BPHYT_RS34585	0.62	-0.8