Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34185

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,272,309	-				+0.6
3,272,309	-				+0.5
3,272,790	+				+0.1
3,272,791	-				+1.9
3,272,843	-				+1.5
3,272,843	-				+0.8
3,272,843	-				+0.7
3,272,843	-				+1.4
3,272,843	-				+1.5
3,272,843	-				+0.8
3,272,844	+				-0.9
3,272,844	+				+0.2
3,272,844	+				+0.4
3,272,845	-				+1.2
3,272,845	-				+1.5
3,272,845	-				+0.3
3,272,948	-				+1.3
3,272,948	-				+2.0
3,273,052	-				+1.0
3,273,052	-				+1.0
3,273,080	-				+1.8
3,273,080	-				+1.3
3,273,082	+				+0.7
3,273,082	+				+0.3
3,273,082	+				-0.2
3,273,082	+				+1.0
3,273,083	-				+0.9
3,273,158	+				-0.4
3,273,166	+				+0.3
3,273,190	+				+1.3
3,273,201	-				+1.5
3,273,201	-				+1.4
3,273,201	-				+2.2
3,273,201	-				+1.3
3,273,209	+				+0.6
3,273,210	-				+1.5
3,273,238	+				+1.3
3,273,267	+				+1.9
3,273,291	+				+1.9
3,273,292	-				+1.8
3,273,306	+		BPHYT_RS34185	0.13	+3.1
3,273,435	+		BPHYT_RS34185	0.76	+1.7
3,273,436	-		BPHYT_RS34185	0.76	+1.9
3,273,436	-		BPHYT_RS34185	0.76	+1.2
3,273,436	-		BPHYT_RS34185	0.76	+0.9
3,273,481	+				+1.9
3,273,495	+				+0.9
3,273,512	-				+0.9
3,273,525	+				+1.9
3,273,526	-				+1.8