Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28705

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,992,771	+		BPHYT_RS28695	0.85	+0.1
1,992,772	-		BPHYT_RS28695	0.85	+2.0
1,992,805	+		BPHYT_RS28695	0.88	-2.9
1,992,805	+		BPHYT_RS28695	0.88	-1.2
1,992,806	-		BPHYT_RS28695	0.88	+1.0
1,992,823	+		BPHYT_RS28695	0.89	-2.7
1,992,824	-		BPHYT_RS28695	0.89	+0.8
1,992,824	-		BPHYT_RS28695	0.89	+0.3
1,992,824	-		BPHYT_RS28695	0.89	-0.9
1,992,870	-				+0.8
1,993,462	+				-0.6
1,993,463	-				+1.2
1,993,493	-				-1.9
1,993,499	-				-0.0
1,993,693	-		BPHYT_RS28705	0.11	-1.5
1,994,587	+				-1.4
1,994,587	+				+0.8
1,994,704	+		BPHYT_RS28710	0.14	+1.2
1,994,966	-		BPHYT_RS28710	0.32	-1.0
1,995,301	+		BPHYT_RS28710	0.56	+0.5
1,995,387	-		BPHYT_RS28710	0.62	-1.4