Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28660

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,981,844	-		BPHYT_RS28645	0.80	+1.8
1,981,844	-		BPHYT_RS28645	0.80	+0.7
1,981,858	-		BPHYT_RS28645	0.81	+0.2
1,981,890	+		BPHYT_RS28645	0.85	-2.0
1,981,891	-		BPHYT_RS28645	0.85	+0.8
1,981,898	+		BPHYT_RS28645	0.85	+0.3
1,981,900	+		BPHYT_RS28645	0.86	-0.6
1,982,046	+				-1.3
1,982,338	-		BPHYT_RS28650	0.76	+0.5
1,982,806	+				+0.0
1,983,253	+		BPHYT_RS28660	0.51	-0.6
1,983,552	+		BPHYT_RS28660	0.86	-2.3
1,983,618	-				+0.1
1,983,618	-				+0.8
1,983,766	-				-1.3
1,983,768	-				-0.4
1,983,928	+				-0.6
1,983,928	+				-0.3
1,983,989	-				-1.2
1,984,149	-				+0.9
1,984,152	+				-0.8
1,984,152	+				-1.9
1,984,156	+				+0.3
1,984,335	+				+0.8
1,984,467	+				+0.3
1,984,468	-				+1.0