Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28135

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,869,344	+				+0.7
1,869,348	+				+1.9
1,869,580	-		BPHYT_RS28130	0.30	-0.4
1,869,729	-		BPHYT_RS28130	0.50	+0.8
1,870,003	+		BPHYT_RS28130	0.87	-1.1
1,870,004	-		BPHYT_RS28130	0.87	-1.0
1,870,110	-				-1.5
1,870,830	+		BPHYT_RS28135	0.64	-1.5
1,870,843	-		BPHYT_RS28135	0.65	+0.0
1,870,843	-		BPHYT_RS28135	0.65	-1.0
1,870,985	-		BPHYT_RS28135	0.79	-1.5
1,871,362	+				-0.3
1,871,387	+				+1.3
1,871,388	-				+1.3
1,871,388	-				+0.3
1,871,445	-				-1.2
1,871,670	+		BPHYT_RS28140	0.38	-0.6
1,871,917	+				-0.1
1,871,917	+				+1.2
1,871,918	-				+1.3
1,871,918	-				-0.6
1,872,117	+		BPHYT_RS28145	0.14	-2.8
1,872,118	-		BPHYT_RS28145	0.14	+0.3