Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27800

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,797,994	+		BPHYT_RS27795	0.42	-1.0
1,797,994	+		BPHYT_RS27795	0.42	+1.2
1,798,022	+		BPHYT_RS27795	0.46	-0.5
1,798,131	-		BPHYT_RS27795	0.62	-0.3
1,798,131	-		BPHYT_RS27795	0.62	+1.7
1,798,182	+		BPHYT_RS27795	0.70	+0.7
1,798,260	+		BPHYT_RS27795	0.82	-1.2
1,798,260	+		BPHYT_RS27795	0.82	+0.8
1,798,592	-				+0.3
1,798,960	-		BPHYT_RS27800	0.31	-1.4
1,798,960	-		BPHYT_RS27800	0.31	+0.7
1,799,621	+		BPHYT_RS27800	0.83	-2.8
1,799,621	+		BPHYT_RS27800	0.83	-1.6
1,799,715	+				+1.5
1,799,765	-				+0.2
1,799,796	-				-2.5
1,799,963	-				-0.3
1,800,287	-		BPHYT_RS27805	0.27	-0.7
1,800,667	+		BPHYT_RS27805	0.55	-0.5
1,800,668	-		BPHYT_RS27805	0.55	-0.1