Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25035

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,185,564	-				+0.3
1,185,633	-				+0.5
1,185,633	-				+0.8
1,185,965	+		BPHYT_RS25030	0.35	+0.1
1,186,186	-		BPHYT_RS25030	0.63	+1.7
1,186,344	-		BPHYT_RS25030	0.84	-0.4
1,186,486	-				+0.1
1,186,631	+				+0.6
1,186,792	+		BPHYT_RS25035	0.14	-2.0
1,186,823	+		BPHYT_RS25035	0.16	-2.1
1,187,015	+		BPHYT_RS25035	0.27	-2.8
1,187,015	+		BPHYT_RS25035	0.27	-2.5
1,187,413	-		BPHYT_RS25035	0.50	-0.7
1,187,499	-		BPHYT_RS25035	0.56	-0.0
1,187,592	-		BPHYT_RS25035	0.61	-0.2
1,188,330	+				+0.7
1,188,331	-				+0.7
1,188,960	+				-0.3
1,189,024	-		BPHYT_RS25045	0.16	-2.2
1,189,024	-		BPHYT_RS25045	0.16	+0.2