Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24690

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,107,040	+				-1.0
1,107,093	+		BPHYT_RS24685	0.15	+0.6
1,107,094	-		BPHYT_RS24685	0.16	+0.0
1,107,384	+		BPHYT_RS24685	0.48	-0.2
1,107,385	-		BPHYT_RS24685	0.48	-2.7
1,107,509	+		BPHYT_RS24685	0.62	-0.1
1,107,656	-		BPHYT_RS24685	0.78	+0.1
1,108,224	-		BPHYT_RS24690	0.30	-0.3
1,108,409	-		BPHYT_RS24690	0.47	-0.6
1,108,437	+		BPHYT_RS24690	0.49	+0.8
1,108,450	+		BPHYT_RS24690	0.51	-1.6
1,108,450	+		BPHYT_RS24690	0.51	-1.4
1,108,525	+		BPHYT_RS24690	0.57	-0.8
1,108,525	+		BPHYT_RS24690	0.57	-1.6
1,108,525	+		BPHYT_RS24690	0.57	-1.8
1,108,526	-		BPHYT_RS24690	0.58	-1.3
1,108,526	-		BPHYT_RS24690	0.58	-0.5
1,109,095	+				-0.3
1,109,369	+				+0.9
1,109,369	+				-1.0
1,109,370	-				-0.4
1,109,372	+				-0.6
1,109,372	+				-2.2
1,109,744	-				-0.1
1,109,823	+				-0.1
1,109,823	+				-0.3
1,109,823	+				-2.1
1,109,824	-				+0.6
1,109,824	-				-0.2
1,109,836	-				+0.5
1,109,836	-				+2.2
1,109,865	-				+1.0
1,109,865	-				+0.3
1,109,877	-				-0.5
1,109,927	-				+0.2
1,109,936	+				-0.9
1,109,936	+				-0.2
1,109,936	+				+0.4
1,109,936	+				-0.9
1,109,937	-				+0.5
1,109,937	-				+0.2