Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24655

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
1,100,519	+		BPHYT_RS24645	0.75	+0.5
1,100,520	-		BPHYT_RS24645	0.75	+0.6
1,100,520	-		BPHYT_RS24645	0.75	+0.1
1,100,532	+		BPHYT_RS24645	0.77	+1.0
1,100,744	+				+0.2
1,100,843	-		BPHYT_RS24650	0.21	+0.2
1,100,863	+		BPHYT_RS24650	0.23	-1.0
1,100,864	-		BPHYT_RS24650	0.24	+0.0
1,100,915	+		BPHYT_RS24650	0.30	+0.5
1,100,915	+		BPHYT_RS24650	0.30	-0.7
1,100,915	+		BPHYT_RS24650	0.30	+0.4
1,101,072	+		BPHYT_RS24650	0.51	-0.3
1,101,256	+		BPHYT_RS24650	0.76	+0.4
1,101,257	-		BPHYT_RS24650	0.76	-0.1
1,101,257	-		BPHYT_RS24650	0.76	-1.5
1,101,257	-		BPHYT_RS24650	0.76	+0.2
1,101,427	+				-0.6
1,101,427	+				+0.4
1,101,428	-				+0.0
1,101,428	-				+0.8
1,101,428	-				-0.1
1,101,497	+				+1.4
1,101,772	-		BPHYT_RS24655	0.33	-2.7
1,102,376	+				-0.7
1,102,377	-				+0.1
1,102,791	+		BPHYT_RS24660	0.38	-0.2
1,102,791	+		BPHYT_RS24660	0.38	+0.5
1,102,791	+		BPHYT_RS24660	0.38	-0.2
1,102,792	-		BPHYT_RS24660	0.38	+0.2
1,102,792	-		BPHYT_RS24660	0.38	-0.0