Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS20635

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
187,634	+				+0.1
187,785	+				-1.1
187,804	+				-0.1
187,804	+				-0.3
187,805	-				-0.1
187,983	+				-2.4
188,147	+				-0.0
188,683	+		BPHYT_RS20635	0.34	-0.7
188,713	+		BPHYT_RS20635	0.36	-1.9
188,863	+		BPHYT_RS20635	0.45	-0.9
188,924	-		BPHYT_RS20635	0.48	-0.0
189,064	+		BPHYT_RS20635	0.57	-0.2
189,318	+		BPHYT_RS20635	0.72	-0.2
189,318	+		BPHYT_RS20635	0.72	+0.2
189,319	-		BPHYT_RS20635	0.72	-0.7
189,946	+				+0.3
190,030	+				+0.3
190,031	-				+1.1
190,031	-				-1.8
190,031	-				+1.3
190,063	-				-0.6
190,079	-				-1.9
190,283	-		BPHYT_RS20640	0.15	+1.3
190,299	-		BPHYT_RS20640	0.16	-0.9