Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18600

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
4,184,011	-				+0.6
4,184,115	-		BPHYT_RS18600	0.15	+0.9
4,184,611	+				+0.2
4,184,643	-				-1.0
4,184,677	+				-2.0
4,184,678	-				-0.8
4,184,758	+				+1.4
4,184,971	+		BPHYT_RS18605	0.29	-1.2
4,185,019	+		BPHYT_RS18605	0.34	-0.7
4,185,020	-		BPHYT_RS18605	0.34	-0.4
4,185,020	-		BPHYT_RS18605	0.34	+0.0
4,185,086	-		BPHYT_RS18605	0.41	-0.0
4,185,265	+		BPHYT_RS18605	0.60	-0.3
4,185,265	+		BPHYT_RS18605	0.60	+0.8
4,185,266	-		BPHYT_RS18605	0.60	-0.5
4,185,266	-		BPHYT_RS18605	0.60	-2.3
4,185,305	+		BPHYT_RS18605	0.64	-0.1
4,185,305	+		BPHYT_RS18605	0.64	+0.4
4,185,305	+		BPHYT_RS18605	0.64	-0.5
4,185,305	+		BPHYT_RS18605	0.64	-0.8
4,185,305	+				+1.2
4,185,306	-		BPHYT_RS18605	0.64	+0.3
4,185,306	-		BPHYT_RS18605	0.64	-1.7
4,185,539	-		BPHYT_RS18605	0.88	-0.4
4,185,608	+				-0.9
4,185,608	+				+0.7
4,185,627	-				-1.0