Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17765

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
4,009,025	+				-0.2
4,009,026	-				+0.7
4,009,026	-				+1.2
4,009,026	-				+0.6
4,009,082	+				-0.4
4,009,292	+		BPHYT_RS17760	0.35	-0.7
4,009,292	+		BPHYT_RS17760	0.35	-2.7
4,009,577	+		BPHYT_RS17760	0.72	-1.1
4,009,578	-		BPHYT_RS17760	0.72	-1.1
4,009,580	+		BPHYT_RS17760	0.72	-0.9
4,009,581	-		BPHYT_RS17760	0.73	-1.2
4,009,643	+		BPHYT_RS17760	0.81	-1.8
4,009,643	+		BPHYT_RS17760	0.81	-0.5
4,009,644	-		BPHYT_RS17760	0.81	-3.1
4,009,644	-		BPHYT_RS17760	0.81	-1.1
4,009,648	-		BPHYT_RS17760	0.81	-1.7
4,009,740	-				-1.8
4,009,740	-				-1.8
4,009,963	+		BPHYT_RS17765	0.21	-0.9
4,009,964	-		BPHYT_RS17765	0.21	-1.1
4,009,964	-		BPHYT_RS17765	0.21	-1.1
4,009,964	-		BPHYT_RS17765	0.21	-1.3
4,010,107	+		BPHYT_RS17765	0.39	-2.9
4,010,108	-		BPHYT_RS17765	0.39	-1.2
4,010,108	-		BPHYT_RS17765	0.39	-1.1
4,010,108	-		BPHYT_RS17765	0.39	-3.4
4,010,586	+				+0.1
4,010,587	-				+0.2
4,010,587	-				-0.7
4,010,628	-				+0.0
4,010,643	+				-1.2
4,010,643	+				-1.0
4,010,644	-				+0.0
4,010,645	+				-1.1
4,010,689	-				-0.2
4,010,692	+				-0.2
4,010,692	+				+0.6
4,010,692	+				+0.7
4,010,692	+				+0.8
4,010,693	-				+0.1
4,010,693	-				-0.3