Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17620

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,985,901	+				-2.2
3,985,901	+				-1.3
3,985,902	-				+1.4
3,985,919	+				+1.2
3,986,724	-				+0.1
3,986,724	-				-0.1
3,986,731	-				-2.0
3,986,888	-		BPHYT_RS17620	0.22	-1.8
3,987,066	+		BPHYT_RS17620	0.46	-2.3
3,987,066	+		BPHYT_RS17620	0.46	-1.6
3,987,093	-		BPHYT_RS17620	0.49	-2.0
3,987,093	-		BPHYT_RS17620	0.49	-1.6
3,987,098	+		BPHYT_RS17620	0.50	+2.2
3,987,099	-		BPHYT_RS17620	0.50	-0.3
3,987,099	-		BPHYT_RS17620	0.50	-1.2
3,987,282	-		BPHYT_RS17620	0.74	-1.1
3,987,282	-		BPHYT_RS17620	0.74	-1.0
3,987,318	-		BPHYT_RS17620	0.79	-3.5
3,987,323	-		BPHYT_RS17620	0.79	-2.1
3,987,323	-		BPHYT_RS17620	0.79	-1.1
3,987,463	-				-0.4
3,987,463	-				-1.2
3,987,501	-				+1.2
3,987,588	-				+0.6
3,987,588	-				-1.2
3,987,588	-				-0.9
3,987,640	-		BPHYT_RS17625	0.10	-1.7
3,987,913	+		BPHYT_RS17625	0.30	-2.0
3,987,914	-		BPHYT_RS17625	0.30	-0.0
3,987,914	-		BPHYT_RS17625	0.30	-1.4
3,987,965	+		BPHYT_RS17625	0.34	-1.2
3,987,965	+		BPHYT_RS17625	0.34	-0.6
3,987,966	-		BPHYT_RS17625	0.34	-0.8
3,988,052	+		BPHYT_RS17625	0.40	-0.9
3,988,053	-		BPHYT_RS17625	0.40	-1.8
3,988,136	+		BPHYT_RS17625	0.46	+0.5
3,988,137	-		BPHYT_RS17625	0.46	-1.6
3,988,139	+		BPHYT_RS17625	0.46	-0.3
3,988,139	+		BPHYT_RS17625	0.46	-2.5
3,988,140	-		BPHYT_RS17625	0.46	-1.4
3,988,334	+		BPHYT_RS17625	0.61	-1.2
3,988,335	-		BPHYT_RS17625	0.61	-1.6