Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15040

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,419,862	+		BPHYT_RS15035	0.41	-0.9
3,420,520	+				+0.1
3,420,521	-				-0.9
3,420,521	-				+0.1
3,420,539	+				-0.2
3,420,539	+				+0.3
3,420,540	-				-0.3
3,420,546	-				-1.2
3,420,546	-				-1.1
3,420,617	-				-0.0
3,420,847	+		BPHYT_RS15040	0.32	+0.4
3,420,848	-		BPHYT_RS15040	0.32	+0.7
3,420,848	-		BPHYT_RS15040	0.32	-1.1
3,420,925	+		BPHYT_RS15040	0.42	-1.3
3,420,926	-		BPHYT_RS15040	0.42	-0.6
3,421,000	+		BPHYT_RS15040	0.53	+1.0
3,421,004	-		BPHYT_RS15040	0.53	-0.5
3,421,212	-		BPHYT_RS15040	0.82	-0.0
3,421,606	-				-0.6
3,422,231	+		BPHYT_RS15045	0.24	-0.5
3,422,231	+		BPHYT_RS15045	0.24	-0.8
3,422,232	-		BPHYT_RS15045	0.24	-0.5
3,422,232	-		BPHYT_RS15045	0.24	-0.4
3,422,232	-		BPHYT_RS15045	0.24	-1.2
3,422,333	+		BPHYT_RS15045	0.31	+0.1
3,422,334	-		BPHYT_RS15045	0.31	-1.2