Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14485

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,300,339	-		BPHYT_RS14480	0.81	-0.2
3,300,400	-		BPHYT_RS14480	0.87	+0.4
3,300,400	-		BPHYT_RS14480	0.87	+0.1
3,300,400	-		BPHYT_RS14480	0.87	+0.3
3,300,518	-				+0.8
3,300,544	+				-0.1
3,301,179	+				+2.4
3,301,179	+				+1.4
3,301,179	+				+2.0
3,302,819	-		BPHYT_RS14485	0.47	+2.3
3,303,830	+		BPHYT_RS14485	0.78	+1.3
3,303,831	-		BPHYT_RS14485	0.78	+1.8
3,303,831	-		BPHYT_RS14485	0.78	+2.1
3,303,935	+		BPHYT_RS14485	0.81	+0.4
3,304,558	+				+1.0
3,304,719	+				-0.3
3,304,720	-				-1.0
3,304,926	+		BPHYT_RS14490	0.14	-1.6
3,304,959	+		BPHYT_RS14490	0.17	-1.3
3,304,959	+		BPHYT_RS14490	0.17	-0.5
3,304,959	+		BPHYT_RS14490	0.17	-1.1
3,304,959	+		BPHYT_RS14490	0.17	-1.1
3,305,072	-		BPHYT_RS14490	0.27	+3.2
3,305,072	-		BPHYT_RS14490	0.27	+0.2
3,305,251	+		BPHYT_RS14490	0.43	-0.9
3,305,252	-		BPHYT_RS14490	0.43	+0.2
3,305,439	+		BPHYT_RS14490	0.60	-1.4
3,305,440	-		BPHYT_RS14490	0.60	-1.4
3,305,440	-		BPHYT_RS14490	0.60	-1.5
3,305,440	-		BPHYT_RS14490	0.60	-1.7