Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14405

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,286,746	+				+0.7
3,286,801	-				+1.7
3,286,836	+				+2.1
3,286,836	+				+2.1
3,286,930	-		BPHYT_RS14400	0.15	-0.7
3,287,314	-		BPHYT_RS14400	0.76	+2.3
3,287,314	-		BPHYT_RS14400	0.76	+2.9
3,287,357	-		BPHYT_RS14400	0.83	+2.4
3,287,479	+				+1.4
3,287,479	+				+2.0
3,287,480	-				-0.3
3,287,480	-				+1.3
3,287,485	+				+2.1
3,287,485	+				+1.4
3,287,486	-				-0.2
3,287,514	-				+1.1
3,288,193	-				+1.0
3,288,193	-				+0.7
3,288,218	-				+0.7
3,288,218	-				+0.6
3,288,324	+		BPHYT_RS14410	0.20	+2.2
3,288,494	-		BPHYT_RS14410	0.64	-0.3
3,288,546	-		BPHYT_RS14410	0.77	+1.1
3,288,583	+		BPHYT_RS14410	0.87	-0.1