Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13640

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,108,735	-				-1.1
3,108,735	-				-0.6
3,108,735	-				+0.6
3,109,557	-				+3.2
3,109,591	-				+3.5
3,109,592	+				+2.8
3,109,593	-				+2.0
3,109,593	-				+2.4
3,109,593	-				+2.6
3,109,597	-				+3.0
3,109,597	-				+3.1
3,109,597	-				+2.5
3,109,597	-				+3.0
3,109,597	-				+2.8
3,109,597	-				+3.3
3,109,597	-				+3.1
3,109,625	-		BPHYT_RS13645	0.11	+1.2
3,109,671	-		BPHYT_RS13645	0.13	+2.2
3,109,872	+		BPHYT_RS13645	0.24	+2.6
3,109,928	+		BPHYT_RS13645	0.27	+1.8
3,109,929	-		BPHYT_RS13645	0.27	+1.9
3,109,929	-		BPHYT_RS13645	0.27	+1.6
3,109,929	-		BPHYT_RS13645	0.27	+1.7
3,109,946	+		BPHYT_RS13645	0.28	+3.2
3,110,108	+		BPHYT_RS13645	0.36	+2.4
3,110,108	+		BPHYT_RS13645	0.36	+2.5
3,110,108	+		BPHYT_RS13645	0.36	+1.9
3,110,109	-		BPHYT_RS13645	0.36	+1.4
3,110,109	-		BPHYT_RS13645	0.36	+2.4
3,110,109	-		BPHYT_RS13645	0.36	+1.8
3,110,128	-		BPHYT_RS13645	0.37	+2.2
3,110,128	-		BPHYT_RS13645	0.37	+1.5
3,110,176	-		BPHYT_RS13645	0.40	+2.6
3,110,176	-		BPHYT_RS13645	0.40	+2.2
3,110,242	-		BPHYT_RS13645	0.43	+2.3
3,110,268	-		BPHYT_RS13645	0.44	+2.0
3,110,268	-		BPHYT_RS13645	0.44	+1.7