Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13285

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
3,032,065	-		BPHYT_RS13280	0.51	+0.1
3,032,166	+		BPHYT_RS13280	0.57	-0.8
3,032,166	+		BPHYT_RS13280	0.57	-0.8
3,032,167	-		BPHYT_RS13280	0.57	+0.4
3,032,268	+		BPHYT_RS13280	0.62	+0.3
3,032,269	-		BPHYT_RS13280	0.63	-0.4
3,032,269	-		BPHYT_RS13280	0.63	-1.1
3,032,356	-		BPHYT_RS13280	0.68	+2.0
3,032,493	+		BPHYT_RS13280	0.76	+0.3
3,032,493	+		BPHYT_RS13280	0.76	+0.4
3,032,494	-		BPHYT_RS13280	0.76	-1.2
3,032,673	+		BPHYT_RS13280	0.86	-0.2
3,032,833	-				-1.4
3,032,833	-				-0.2
3,032,910	+				-0.5
3,033,059	+				+2.0
3,033,059	+				-1.9
3,033,060	-				+0.2
3,033,060	-				-0.5
3,033,152	+		BPHYT_RS13285	0.15	-0.5
3,033,225	-		BPHYT_RS13285	0.25	-1.0
3,033,225	-		BPHYT_RS13285	0.25	-1.2
3,033,225	-		BPHYT_RS13285	0.25	-1.4
3,033,772	+				+0.4
3,033,910	-		BPHYT_RS13290	0.16	+1.1
3,033,910	-		BPHYT_RS13290	0.16	-0.6
3,033,927	+		BPHYT_RS13290	0.19	+0.6
3,033,928	-		BPHYT_RS13290	0.19	+0.8
3,034,170	+		BPHYT_RS13290	0.55	-1.2
3,034,171	-		BPHYT_RS13290	0.55	-0.9
3,034,303	-		BPHYT_RS13290	0.74	-0.5
3,034,303	-		BPHYT_RS13290	0.74	+0.2
3,034,428	+				+1.4
3,034,430	+				+0.0
3,034,431	-				-1.0
3,034,431	-				-3.4
3,034,526	-				-0.4
3,034,655	+		BPHYT_RS13295	0.20	+0.1