Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13095

Experiment: 36hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO3 MOI 1
2,992,444	+		BPHYT_RS13090	0.43	+0.3
2,992,445	-		BPHYT_RS13090	0.43	-0.2
2,992,445	-		BPHYT_RS13090	0.43	-0.8
2,992,445	-		BPHYT_RS13090	0.43	-1.8
2,992,538	-		BPHYT_RS13090	0.49	-0.2
2,992,538	-		BPHYT_RS13090	0.49	-0.8
2,992,767	-		BPHYT_RS13090	0.63	-0.1
2,992,767	-		BPHYT_RS13090	0.63	-1.1
2,992,767	-		BPHYT_RS13090	0.63	+0.6
2,992,878	-		BPHYT_RS13090	0.70	+0.3
2,993,029	+		BPHYT_RS13090	0.80	-0.2
2,993,030	-		BPHYT_RS13090	0.80	-1.4
2,993,090	+		BPHYT_RS13090	0.83	+0.1
2,993,244	+				-1.1
2,993,244	+				-0.7
2,993,245	-				+1.1
2,993,352	+				-1.0
2,993,353	-				+0.8
2,993,372	+				-1.5
2,993,833	+				-0.1
2,993,833	+				-1.5
2,993,834	-				+1.2
2,993,897	+				+0.0
2,993,898	-				-1.4
2,993,898	-				-1.7
2,994,024	+				+1.3
2,994,024	+				-0.0
2,994,098	+				-0.8
2,994,287	+				+0.6
2,994,287	+				-1.0
2,994,287	+				-0.5
2,994,288	-				-1.5
2,994,288	-				-0.5
2,994,288	-				-1.2
2,994,485	-				+0.7
2,994,801	-		BPHYT_RS13105	0.23	+0.5